Extract Genes from Scientific Publications

Upload your publications or PubMed links and start working with all gene entries within your files.

Try the beta version for free today!
* For a limited time only.

The benefits of KnoraGene

Core Features

Data Management

Overview dashboard of all your uploads and extracted genes so you won’t waste time during your research anymore.

Save Time

Batch-upload multiple PDFs and PubMed publications at once.

Workflow Integration

Extracted genes are come with NCBI compatible context and are ready to be exported for your convenience.

Scientific literature research

No Need to Manually Scan Publications for Genes Anymore

Rapid Automated Extraction

KnoraGene is able to handle up to 100 PDF files and 100 PubMed links at the same time. The extraction takes about 60 seconds.

Only Valid Data

KnoraGene is pulling results from trusted sources such as NCBI, PubMed, or Medline. Finally, no more double-checking!

KnoraGene helps you get organized at early stage scientific research.

Upload the publications that you want to scan and after clicking one button, you will see a list of all genes that are mentioned within your documents.

KnoraGene Beta

Beta offering

A free gene database with 1000s of entries.

Free access to your gene and publication library 24/7.

Full control over your extracted data and all genes.

Report errors and submit feature requests.

About the team

We want to help scientists around the world to focus on the important parts of their research.

Repetitive and time consuming tasks can delay your success.

At the beginning of every scientific literature process, it is important to get an overview of relevant publications, so we understand what research already exists. This is especially important for genetics, who already investigated certain genes.

KnoraGene assists you while you work on the actual project instead of hand selecting every single gene mentioned within all of the publications you need to read through.

Future-ready technology meets the bench, don’t stay behind!

Our team of scientists, designers, and developers share a heart for scientific research and put all of their passion into KnoraGene. Thank you for using our beta version to help us make this your go-to tool for gene extraction.

In future releases, we are planning to make your research data even more tangible and connected with KnoraGraph.

How KnoraGene is working

Connected Data to Improve Your Research Process

Extraction in progress
  1. 1

    Upload PDFs or add PubMed IDs.

  2. 2

    Extract genes.

  3. 3

    Review the detailed gene information.

  4. 4

    Export your extracted genes to CSV. Either individually, or as a batch.

Knowledge graphs

Connected Knowledge to Revolutionize Scientific Literature Research

We know that it can be challenging to keep a cool head while juggling hundreds of topics at the same time and trying to keep an overview on everything you already read.

With KnoraGraph, you will be able to streamline your research in a single view.

Knowledge Graph Key Features

Retrieve previous research states and automatically create a “back-up” of your scientific literature research

Share your current research state with your co-workers

Discover interesting genes and publications that you would have missed otherwise

Extracting genes has never been easier.


© Merck KGaA, Darmstadt, Germany, 2021